BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036C10LP1|AL430202
(926 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig220 755 0.0
>3x_Contig220
Length = 1055
Score = 755 bits (380), Expect = 0.0
Identities = 387/388 (99%), Gaps = 1/388 (0%)
Strand = Plus / Plus
Query: 1 gtgcttgcctttcagttatacctttcttccttttgattcaaaggttcttgacatcaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 gtgcttgcctttcagttatacctttcttccttttgattcaaaggttcttgacatcaaaat 716
Query: 61 tgttactaagttgtaactcgaatctttaattataaacacatatacaaaacaaagaacgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 tgttactaagttgtaactcgaatctttaattataaacacatatacaaaacaaagaacgat 776
Query: 121 acttctcaacagagaaaagaggatagtttagttaagaggccagaaaatagcctaactttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 acttctcaacagagaaaagaggatagtttagttaagaggccagaaaatagcctaactttt 836
Query: 181 agaaaagtattatactctgggtccataccgcatgaggttacaaaattggattccagtttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 agaaaagtattatactctgggtccataccgcatgaggttacaaaattggattccagtttt 896
Query: 241 gcttctagcagccatcgtgacggctgaagtaga-ctttgaagttaatccagttgacaacg 299
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 897 gcttctagcagccatcgtgacggctgaagtagagctttgaagttaatccagttgacaacg 956
Query: 300 aaacagaatcagttcagcaagatgttatagatgaaagctggaatgcagagcctggggaat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957 aaacagaatcagttcagcaagatgttatagatgaaagctggaatgcagagcctggggaat 1016
Query: 360 catcgagaataacacagtcctcgaagtt 387
||||||||||||||||||||||||||||
Sbjct: 1017 catcgagaataacacagtcctcgaagtt 1044
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6399
Number of Sequences: 1807
Number of extensions: 6399
Number of successful extensions: 27
Number of sequences better than 1.0e-20: 1
length of query: 926
length of database: 10,358,551
effective HSP length: 16
effective length of query: 910
effective length of database: 10,329,639
effective search space: 9399971490
effective search space used: 9399971490
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)